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How to convert the .matrix format of hicpro to .npy format

Status: Open.

#110 In hiclib/pastis;

· NingYang18 opened on Feb 11, 2025

pastis-mds model with HiC contact map input

Status: Open.

#109 In hiclib/pastis;

· beyzoskaya opened on Dec 3, 2024

I use the mds model. The error message is as follows

Status: Open.

#108 In hiclib/pastis;

· lanyunxin opened on Nov 6, 2023

How to convert .hic or cool format to .npy file?

Status: Open.

#107 In hiclib/pastis;

· hanshanmengqi opened on Aug 17, 2023

Diploid genome structure

Status: Open.

#106 In hiclib/pastis;

· jinlizhang200706 opened on Jul 10, 2023

New pip package?

Status: Open.

#105 In hiclib/pastis;

· pierrepo opened on Jan 17, 2023

is this tool still available?

Status: Open.

#104 In hiclib/pastis;

· PengfeiInTuebingen opened on Jan 3, 2023

How to choose one chromosome for construction ?

Status: Open.

#103 In hiclib/pastis;

· liufuyan2016 opened on Oct 31, 2022

I don't know how to use the "Pastis-NB" model

Status: Open.

#102 In hiclib/pastis;

· shenlinyong opened on Jul 11, 2022

It seems that an error exists in the code

Status: Open.

#98 In hiclib/pastis;

· fangzhen-li opened on Dec 29, 2021

Is this still available?

Status: Open.

#97 In hiclib/pastis;

· biofcallejas opened on Dec 8, 2021

Can pastis reconstruct 3D model for the whole genome?

Status: Open.

#92 In hiclib/pastis;

· hzjsxu opened on May 7, 2021