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Description
I have several images on a cloud object store. I can get normal http routes to these images and I'm happy to see that pims can read these individually. However, my guess is that normal glob processing won't successfully find all of the images on the cloud object store. I'm happy to provide this list myself, but it looks like I'm unable to past a list of filenames into pims.open.
In [1]: import pims
In [2]: url = 'https://pydata.org/images/logo.png'
In [3]: pims.open(url)
Out[3]:
<Frames>
Length: 1 frames
Frame Shape: 53 x 126
Pixel Datatype: uint8
In [4]: pims.open([url, url, url])
---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-4-4b4693a3872c> in <module>()
----> 1 pims.open([url, url, url])
~/Software/anaconda/lib/python3.6/site-packages/pims/api.py in open(sequence, **kwargs)
147 >>> frame_shape = video.frame_shape # Pixel dimensions of video
148 """
--> 149 files = glob.glob(sequence)
150 if len(files) > 1:
151 # todo: test if ImageSequence can read the image type,
~/Software/anaconda/lib/python3.6/glob.py in glob(pathname, recursive)
18 zero or more directories and subdirectories.
19 """
---> 20 return list(iglob(pathname, recursive=recursive))
21
22 def iglob(pathname, *, recursive=False):
~/Software/anaconda/lib/python3.6/glob.py in _iglob(pathname, recursive, dironly)
38
39 def _iglob(pathname, recursive, dironly):
---> 40 dirname, basename = os.path.split(pathname)
41 if not has_magic(pathname):
42 assert not dironly
~/Software/anaconda/lib/python3.6/posixpath.py in split(p)
103 """Split a pathname. Returns tuple "(head, tail)" where "tail" is
104 everything after the final slash. Either part may be empty."""
--> 105 p = os.fspath(p)
106 sep = _get_sep(p)
107 i = p.rfind(sep) + 1
TypeError: expected str, bytes or os.PathLike object, not listNote that this behavior is currently advertised in the docstring
In [5]: pims.open?
Signature: pims.open(sequence, **kwargs)
Docstring:
Read a filename, list of filenames, or directory of image files into an
iterable that returns images as numpy arrays.
Parameters
----------
sequence : string, list of strings, or glob
The sequence you want to load. This can be a directory containing
images, a glob ('/path/foo*.png') pattern of images,
a video file, or a tiff stack
kwargs :
All keyword arguments will be passed to the reader.
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